Plant Image Analysis Plant Image Analysis

Sorghum Reconstruction

Mullet Lab @ Texas A&M University
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Scientific article
3D sorghum reconstructions from depth images identify QTL regulating shoot architecture.
RF. Mccormick, SK. Truong, JE. Mullet,
2016 , Plant Physiol. , 0(0), 0
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Description

Sorghum Recontruction is a semiautomated software pipeline was developed and used to generate segmented, 3D plant reconstructions from the images. Automated measurements made from 3D plant reconstructions identified quantitative trait loci for standard measures of shoot architecture, such as shoot height, leaf angle, and leaf length, and for novel composite traits, such as shoot compactness.


Source: Plant Physiology

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Overview
Operating system
windows, mac, linux,

Licence
open-source, freeware,

Measured variables
length, width, surface, shape,

Automation level
automated,

Plant requirements
sorghum,

Image requirements
3D depth images,

Export formats
csv,

Other information
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