SeedSize


Nathan Miller, Logan Johnson, Kris Kvilekval and Dmitry Fedorov

Overview

Measured variables length, width, n-seeds, surface
Operating system windows, mac, linux
Licence freeware
Automation level automated
Plant requirements any
Export formats xml, csv
Other information Works in a web browser. Requires an internet connection. Works as a Bisque module.

Scientific article(s)

Mapping Quantitative Trait Loci Affecting Arabidopsis thaliana Seed Morphology Features Extracted Computationally From Images
Candace R. Moore, David S. Gronwall, Nathan D. Miller, Edgar P. Spalding
G3: Genes|Genomes|Genetics, 2017 View paper

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Description

This algorithm analyses images produced by a flat-bed scanner with seeds layed over the glass surface. Analysis outlines detected seeds and computes their geometrical properties. Works as a Bisque module into the iPlant infrastructure.


Source: SeedSize website

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