Plant Image Analysis Plant Image Analysis

RootNav

Center for Plant Integrative Biology @ University of Nottingham


1 votes for an average of 4/5
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Scientific article
RootNav: Navigating images of complex root architectures.
MP. Pound, AP. French, J. Atkinson, DM. Wells, MJ. Bennett, TP. Pridmore,
2013 , Plant Physiol. , 0(0), 0
View at publisher | Download PDF


Description

RootNav is a software tool designed to facilitate the reconstruction and quantification of complex root architectures. Semi-automated reconstruction makes the analysis of many images extremely quick and straightforward. Root data can be exported, and then analysed in bulk using the supplied viewer tool.


Source: CPIB

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Overview
Operating system
windows,

Licence
open-source,

Measured variables
length, count, convex-hull, insertion, insertion-angle,

Automation level
semi-automated,

Plant requirements
any,

Image requirements
any,

Export formats
sql, csv,

Other information
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