Plant Image Analysis Plant Image Analysis

Phenotic

LISA @ Université d'Angers
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Scientific article
High throughput quantitative phenotyping of plant resistance using chlorophyll fluorescence image analysis.
C. Rousseau, E. Belin, E. Bove, D. Rousseau, F. Fabre, R. Berruyer, J. Guillaumès, C. Manceau, MA. Jacques, T. Boureau,
2013 , Plant Methods , 9(1), 17
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Description

Phenotic is an image analysis procedure for quantifying the leaf area impacted by the pathogen from chlorophyl fluorescence images. Based on the Fv/Fm values of each pixel of the image, a thresholding approach was developed to delimit diseased areas. In a perspective of high throughput phenotyping, the procedure was automated with the software R.



Source: BMC Plant Methods

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Overview
Operating system
windows, mac, linux,

Licence
freeware, open-source,

Measured variables
disease, surface,

Automation level
automated,

Plant requirements
any,

Image requirements
Chlorophyl fluorescence,

Export formats
-,

Other information
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