PDQuantRobatzek lab @ Sainsbury Laboratory
PDQUANT provides an automated image processing workflow that detected and quantified plasmodesmata candidates, identified cell boundaries, and segmented immature cells from older cells. The algorithm segments and quantifies epidermal cells with differentiation of mature from young emerging cells.
Source: Fitzgibbon et al. (2013) The Plant cell , 25(1), 57-70
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Measured variableslocalisation, n-plasmodesmata, perimeter, shape, width, length, surface,
Other informationRequires Acapella to run
Other tools for the analysis of leaf,cell: