Plant Image Analysis Plant Image Analysis

PANorama

McCouch RiceLab @ Cornell University
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Scientific article
High-Resolution Inflorescence Phenotyping Using a Novel Image Analysis Pipeline, PANorama.
S. Crowell, AX. Falcão, A. Shah, Z. Wilson, AJ. Greenberg, SR. McCouch,
2014 , Plant Physiol. , 0(0), 0
View at publisher | Download PDF


Description

PANorama is an open-source phenotyping platform which measures multiple architectural and branching phenotypes from images simultaneously. PANorama automatically extracts skeletons from images, allows users to subdivide axes into individual internodes, and thresholds away structures, such as awns, that normally interfere with accurate panicle phenotyping. PANorama represents an improvement in both efficiency and accuracy over existing panicle imaging platforms, and flexible implementation makes PANorama capable of measuring a range of organs from other plant species.


Source: Plant Physiology

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Overview
Operating system
linux,

Licence
on-demand, freeware,

Measured variables
count, length,

Automation level
automated,

Plant requirements
any,

Image requirements
any,

Export formats
txt, csv,

Other information
-

Additional information
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