NMRooting


IBG2 @ Forzschungzentrum Jülich

Overview

Measured variables length, angle, topology
Operating system windows, mac, linux
Licence freeware
Automation level automated
Plant requirements any
Export formats -
Other information -

Scientific article(s)

Quantitative 3D Analysis of Plant Roots growing in Soil using Magnetic Resonance Imaging
Dagmar van Dusschoten, Ralf Metzner, Johannes Kochs, Johannes A. Postma, Daniel Pflugfelder, Jonas Buehler, Ulrich Schurr, Siegfried Jahnke
Plant Physiology, 2017 View paper

Description

NMRooting can be used to derive Root Structural Architecture parameters from 3D MRI images of soil grown plant roots. The current release of NMRooting is based on Python 2.7 and requires a range of Python specific packages that can be downloaded separately. Instructions will be provided.


Source: NMRooting website

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