Plant Image Analysis Plant Image Analysis


Barbier de Reuille, Pierre, University of Bern, Switzerland
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Scientific article
MorphoGraphX: A platform for quantifying morphogenesis in 4D.
P. Barbier de Reuille, AL. Routier-Kierzkowska, D. Kierzkowski, GW. Bassel, T. Schüpbach, G. Tauriello, N. Bajpai, S. Strauss, A. Weber, A. Kiss, A. Burian, H. Hofhuis, A. Sapala, M. Lipowczan, MB. Heimlicher, S. Robinson, EM. Bayer, K. Basler, P. Koumoutsakos, AH. Roeder, T. Aegerter-Wilmsen, N. Nakayama, M. Tsiantis, A. Hay, D. Kwiatkowska, I. Xenarios, C. Kuhlemeier, RS. Smith,
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LithoGraphX is an open source software for scientists, by scientists. It aims at providing the plant science community with a solid, open, community developed, software for 3D data analysis and visualization.

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Operating system
windows, linux,

open-source, freeware,

Measured variables

Automation level
semi-automated, manual,

Plant requirements

Image requirements
tiff, ome.tiff,

Export formats
csv, ply, obj, vtk, stl,

Other information

Additional information

This software requires a recent graphics card, preferably one with CUDA capabilities.

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