Plant Image Analysis Plant Image Analysis

Leaf Color Segmentation

Scientific Computing Research Unit @ Helmholtz Zentrum München
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Scientific article

A segmentation procedure using colour features applied to images of Arabidopsis thaliana
Ruben Ispiryan, Igor Grigoriev, Wolfgang zu Castell, and Anton R Schäffner
2013, Functional Plant Biology

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Description

The library ‘colorsegmentation’ is designed to separate objects in series of images. It is based on the color features of objects. For each object type (flower, leaf, soil, etc) user should specify few pixels by clicking on the training image on the corresponding object. In an excel file (version 2003) the regions for each color feature are determined based on the visual inspection. Using this configuration excel file, images are segmented and the objects are separated.



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Overview
Operating system
windows, mac, matlab,

Licence
freeware,

Measured variables
surface, convex-hull,

Automation level
automated,

Plant requirements
arabidopsis,

Image requirements
any,

Export formats
xls,

Other information
-

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