Plant Image Analysis Plant Image Analysis


Quantitative Image Analysis Unit @ Institut Pasteur

1 votes for an average of 5/5
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Icy is an open community platform for bioimage informatics. Icy provides the software resources to visualize, annotate and quantify bioimaging data

  • Rate and comment plugins
  • Graphical programming with protocols
  • Write scripts in javascript or python
  • Reactive forum and support
  • Native ImageJ integration
  • Native Micro-Manager integration
  • Share your plugins and protocols online
  • Search and install features directly from Icy
  • Intuitive user interface
  • Connect Icy to Matlab
  • Interactive widgets
  • Build your graphical interface with EzPlug
  • Use the power of your graphic card with OpenCL
  • Watch sequences in polarized stereo
  • Watch 3D data in ray-casting with VTK
  • Access images in MPEG video with Xuggler
  • Watch Matlab image in Icy with Matlab X-server
  • Customize your workspace

Source: Icy website

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Operating system
windows, linux, mac,

freeware, open-source,

Measured variables
length, surface, color, shape, count,

Automation level
automated, manual, semi-automated,

Plant requirements

Image requirements

Export formats
xls, csv,

Other information

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